Package: ScoreEB 0.1.1

ScoreEB: Score Test Integrated with Empirical Bayes for Association Study

Perform association test within linear mixed model framework using score test integrated with empirical bayes for genome-wide association study. Firstly, score test was conducted for each single nucleotide polymorphism (SNP) under linear mixed model framework, taking into account the genetic relatedness and population structure. And then all the potentially associated SNPs were selected with a less stringent criterion. Finally, all the selected SNPs were performed empirical bayes in a multi-locus model to identify the true quantitative trait nucleotide (QTN).

Authors:Wenlong Ren

ScoreEB_0.1.1.tar.gz
ScoreEB_0.1.1.zip(r-4.7)ScoreEB_0.1.1.zip(r-4.6)ScoreEB_0.1.1.zip(r-4.5)
ScoreEB_0.1.1.tgz(r-4.6-any)ScoreEB_0.1.1.tgz(r-4.5-any)
ScoreEB_0.1.1.tar.gz(r-4.7-any)ScoreEB_0.1.1.tar.gz(r-4.6-any)
ScoreEB_0.1.1.tgz(r-4.6-emscripten)
manual.pdf |manual.html
card.svg |card.png
ScoreEB/json (API)

# Install 'ScoreEB' in R:
install.packages('ScoreEB', repos = c('https://wenlongren.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/wenlongren/scoreeb/issues

On CRAN:

Conda:

3.00 score 2 stars 1 scripts 189 downloads 1 exports 1 dependencies

Last updated from:c6b4d91f13. Checks:7 WARNING, 2 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64WARNING125
source / vignettesOK158
linux-release-x86_64WARNING119
macos-release-arm64WARNING151
macos-oldrel-arm64WARNING158
windows-develWARNING73
windows-releaseWARNING60
windows-oldrelWARNING67
wasm-releaseOK83

Exports:ScoreEB

Dependencies:data.table