Package: ScoreEB 0.1.1

ScoreEB: Score Test Integrated with Empirical Bayes for Association Study

Perform association test within linear mixed model framework using score test integrated with empirical bayes for genome-wide association study. Firstly, score test was conducted for each single nucleotide polymorphism (SNP) under linear mixed model framework, taking into account the genetic relatedness and population structure. And then all the potentially associated SNPs were selected with a less stringent criterion. Finally, all the selected SNPs were performed empirical bayes in a multi-locus model to identify the true quantitative trait nucleotide (QTN).

Authors:Wenlong Ren

ScoreEB_0.1.1.tar.gz
ScoreEB_0.1.1.zip(r-4.7-any)ScoreEB_0.1.1.zip(r-4.6-any)ScoreEB_0.1.1.zip(r-4.5-any)
ScoreEB_0.1.1.tgz(r-4.6-any)ScoreEB_0.1.1.tgz(r-4.5-any)
ScoreEB_0.1.1.tar.gz(r-4.7-any)ScoreEB_0.1.1.tar.gz(r-4.6-any)
ScoreEB_0.1.1.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
ScoreEB/json (API)

# Install 'ScoreEB' in R:
install.packages('ScoreEB', repos = c('https://wenlongren.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/wenlongren/scoreeb/issues

On CRAN:

Conda:

3.00 score 2 stars 1 scripts 251 downloads 1 exports 1 dependencies

Last updated from:c6b4d91f13. Checks:7 WARNING, 2 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64WARNING109
source / vignettesOK138
linux-release-x86_64WARNING113
macos-release-arm64WARNING182
macos-oldrel-arm64WARNING169
windows-devel-x86_64WARNING62
windows-release-x86_64WARNING61
windows-oldrel-x86_64WARNING78
wasm-releaseOK86

Exports:ScoreEB

Dependencies:data.table